High Confidence Horizontal Gene Transfers

Downloadable File
Heterodera glycines v2 (Soybean Cyst Nematode (v2))
Program, Pipeline Name or Method Name: 
H. glycines high confidence HGT
Program, Pipeline or Method version: 
Alien Index
Source Name: 
H. glycines high confidence HGT
Time Executed: 
Materials & Methods (Description and/or Program Settings): 
Alien Index (AI) for each transcript using a ratio of similarity to metazoan and non-metazoan sequences [Gladyshev et al. 2008]. These are the 151 genes with strong HGT support (AI>30). Gladyshev EA, Meselson M, Arkhipova IR (2008) Massive horizontal gene transfer in bdelloid rotifers. science 320:1210-1213