PA3 Transcriptome on susceptible and resistant soybean

Downloadable File
Organism: 
Heterodera glycines v2 (Soybean Cyst Nematode (v2))
Program, Pipeline Name or Method Name: 
Trinity transcriptome with Gmap alignment
Program, Pipeline or Method version: 
Trinity 2.3.2, Gmap 2016-04-04
Source Name: 
PA3 H. glycines transcriptome. Grown on susceptible and resistant soybean cultivars
Source Version: 
Grown on susceptible and resistant soybean cultivars Williams 82 or EXF63
Time Executed: 
04/05/2018
Materials & Methods (Description and/or Program Settings): 
Trinity transcriptome was genome guided under default parameters. gmap -D /data013/GIF/remkv6/Baum/CamTechGenomeComparison/30_transcriptMappingUpdated/ -d genome738sl.polished.mitoFixed -B 5 -t 16 --input-buffer-size=1000000 --output-buffer-size=1000000 -f 2 nematode_transcripts_full_Trinity_genome_guided.fasta
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