RedTandem (1) was implemented to identify tandem duplications in the H. glycines V1 genome (2). A total of 6,730/29,769 of the genes in the genome colocalize to the same regions as tandem duplications.
Functional annotations of genes in tandem duplications in a GFF3 form: tandemduplicatedgenesannotatedaugustusgff3.rtf
Functional annotations of predicted effectors in tandem duplications in a GFF3 form: tandemduplicatedeffectorsannotatedaugustusgff3.rtf
1) Audemard, Eric, Thomas Schiex, and Thomas Faraut. "Detecting long tandem duplications in genomic sequences." BMC bioinformatics 13.1 (2012): 83.
2) Masonbrink, Rick E., et al. "The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes." bioRxiv (2018): 391276.